Tidying methods for TMB models

Tidying methods for TMB models

# S3 method for TMB
tidy(
  x,
  effects = c("fixed", "random"),
  conf.int = FALSE,
  conf.level = 0.95,
  conf.method = c("wald", "uniroot", "profile"),
  ...
)

Arguments

x

An object of class TMB (you may need to use class(obj) <- "TMB" on your results from TMB)

effects

which effects should be returned?

conf.int

whether to include a confidence interval

conf.level

confidence level for CI

conf.method

method for computing confidence intervals

...

additional arguments passed to confint function (tmbroot, tmbprofile)

Examples

if (require("TMB")) {

    if (FALSE) {
       runExample("simple",thisR=TRUE)
       class(obj) <- "TMB"
       tidy(obj,conf.int=TRUE,conf.method="wald")
    }
    if (FALSE) tidy(obj,conf.int=TRUE,conf.method="uniroot")
    if (FALSE) tidy(obj,conf.int=TRUE,conf.method="profile")
}
#> Loading required package: TMB
#> Warning: there is no package called ‘TMB’